Research Article |
Corresponding author: S. R. Chandramouli ( findthesnakeman@gmail.com ) Corresponding author: S. Babu ( sanbabs@gmail.com ) Academic editor: Günter Gollmann
© 2023 R. S. Naveen, Shuo Liu, S. R. Chandramouli, S. Babu, P. V. Karunakaran, Honnavalli N. Kumara.
This is an open access article distributed under the terms of the CC0 Public Domain Dedication.
Citation:
Naveen RS, Liu S, Chandramouli SR, Babu S, Karunakaran PV, Kumara HN (2023) Redescription of Rhacophorus tuberculatus (Anderson, 1871) and the validity of Rhacophorus verrucopus Huang, 1983. Herpetozoa 36: 325-333. https://doi.org/10.3897/herpetozoa.36.e113656
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Rhacophorus tuberculatus and Rhacophorus verrucopus are two morphologically similar species described in 1871 and 1983 respectively. Their taxonomic distinctiveness has been questioned in the past. In the current study, we encountered frogs that we confer to R. tuberculatus based on morphological similarity to a syntype of this species. We redescribe the species based on a re-examination of a syntype, which is designated as a lectotype here, and additional specimens from Garo hills of Meghalaya. We also present molecular data, natural history notes, and report a range extension of this species. Molecular phylogenetic analysis based on the 16S rRNA fragment revealed minimal genetic divergences (0.20–1.74% uncorrected p-distance) between specimens identified as either R. tuberculatus or R. verrucopus from different locations. On the basis of molecular data and morphological characteristics, we conclude that R. verrucopus is a junior synonym of R. tuberculatus.
Darwinian shortfall, Indo-Burma hotspot, range extension, Rhacophoridae, synonymy, systematics
Frogs of the genus Rhacophorus Kuhl & Van Hasselt, 1822 occur across South and Southeast Asia and are represented by 44 extant species (
We encountered a Rhacophorus species, the identity of which was difficult to determine, during our recent surveys between 2021 and 2022 in the West Garo hills of Meghalaya, India. Herein, we ascertain the identity of that Rhacophorus species as R. tuberculatus based on comparison with the syntypes of R. tuberculatus and provide a redescription of the species after more than 150 years since its original description, provide photographs of live individuals, morphological measurements and genetic divergence of R. tuberculatus with other congeners using 16S rRNA gene and discuss its relationship with R. verrucopus.
We conducted surveys in Sasatgre village (25.5250°N, 90.3350°E, ca. 940 m) and Baladingre village (25.514213°N, 90.398204°E, ca. 835 m) of West Garo Hills district of Meghalaya between 2020 and 2022.
Frogs were caught by hand, photographed first and euthanized using 20% Benzocaine following
Total genomic DNA was extracted from tissue samples of two specimens of R. tuberculatus (SACON VA 148 and VA 800) with a DNA extraction and purification kit, following the manufacturer’s protocols. 16S rRNA gene was amplified using the primers 16sAR-L (5′-CGCCTGTTTATCAAAAACAT-3′) and 16sBR-H (5′-CCGGTCTGAACTCAGATCACGT 3′) respectively (
List of specimens and GenBank accession numbers for all 16S rRNA sequences included in this study.
Taxon | Voucher No. | Locality | GenBank No. |
---|---|---|---|
Rhacophorus annamensis | VNMN 4090 | Dak Nong, Nam Nung, Vietnam | LC010566 |
Rhacophorus baluensis | FM235958 | Sabah, Malaysia | KC961089 |
Rhacophorus bengkuluensis | UTA A-62770 | Lampung, Sumatra, Indonesia | KM212948 |
Rhacophorus bipunctatus | PUCZM/IX/SL360 | Mizoram, India | MH087073 |
Rhacophorus borneensis | BORN:22410 | Maliau Basin, Sabah, Malaysia | AB781693 |
Rhacophorus calcaneus | VNMN 4093 | Dak Lac, Chu Yang Sin, Vietnam | LC010573 |
Rhacophorus catamitus | ENS 14726 | Sumatra, Indonesia | KX398877 |
Rhacophorus exechopygus | VNMN 4107 | Gia Lai, Kon Ka Kinh, Vietnam | LC010585 |
Rhacophorus helenae | AMS R 173230 | Binh Thuan, Vietnam | JQ288087 |
Rhacophorus hoabinhensis | VNMN A.2016.16 | Hoa Binh, Vietnam | LC331097 |
Rhacophorus indonesiensis | MZB: Amp:23619 | Indonesia | AB983367 |
Rhacophorus kio | VNMN 4110 | Gia Lai, Kon Ka Kinh, Vietnam | LC010589 |
Rhacophorus lateralis | SDB.2010.330 | Karnataka, Bygoor, India | KC571277 |
Rhacophorus malabaricus | Rmal-In | Madikeri, India | AB530549 |
Rhacophorus margaritifer | ENS 16162 | Java, Indonesia | KX398889 |
Rhacophorus modestus | ENS 16853 | Sumatra, Indonesia | KX398904 |
Rhacophorus napoensis | GXNU YU000171 | Napo, Guangxi, China | ON217796 |
Rhacophorus nigropalmatus | Rao081203 | Malaysia | JX219438 |
Rhacophrus norhayatiae | NNRn | Endau Rompin, Johor, Malaysia | AB728191 |
Rhacophorus orlovi | VNMN 3067 | Huong Son, Ha Tinh, Vietnam | LC010598 |
Rhacophorus pardalis | FMNH273243 | Sarawak, Bintulu, Malaysia | JX219454 |
Rhacophorus poecilonotus | ENS 16480 | Sumatra, Indonesia | KX398920 |
Rhacophorus pseudomalabaricus | SDB.2011.1010 | Kerala, Kadalar, India | KC593855 |
Rhacophorus reinwardtii | Rao081205 | Malaysia | JX219443 |
Rhacophorus rhodopus | SCUM 060692L | Mengyang, Yunnan, China | EU215531 |
Rhacophorus robertingeri | VNMN 4123 | Gia Lai, Kon Ka Kinh, Vietnam | LC010613 |
Rhacophorus spelaeus | IEBR A.2011.1 | Khammouan, Lao | LC331095 |
Rhacophorus translineatus | Rao6237 | Motuo, Xizang, China | JX219449 |
Rhacophorus tuberculatus | KIZ014154 | Motuo, Xizang, China | MW111522 |
Rhacophorus “verrucopus” | Rao6254 | Motuo, Xizang, China | JX219436 |
SEABRI2019120056 | Htamanthi, Sagaing, Myanmar | MW275978 | |
Rhacophorus tuberculatus | SACON VA – 148 | Meghalaya, India | OR836578 |
SACON VA – 800 | Meghalaya, India | OR836579 | |
Rhacophorus vampyrus | VNMN 4125 | Hon Ba, Khanh Hoa, Vietnam | LC010616 |
Zhangixalus dennysi | SCUM 060401L | Shaoguan, Guangdong, China | EU215545 |
Zhangixalus dugritei | SCUM 051001L | Baoxing, Sichuan, China | EU215541 |
The following measurements were recorded to the nearest 0.02 mm from the specimens using an INSIZE dial caliper: snout–vent length (SVL, from the tip of the snout to the anterior margin of the cloaca), axilla–groin distance (AG, from the posterior margin of the forelimb at its insertion point on the body to the anterior margin of the hind limb at its insertion point on the body), head length (HL, from the posterior edge of the mandible to the tip of the snout), head width (HW, the maximum width of the head at the angle of the jaws), head depth (HD, the maximum depth of the head), body width (BW, the maximum width of the body at the trunk), eye diameter (ED, the greatest horizontal diameter of the orbit), eye–nostril distance (EN, from the anterior border of the orbit to the middle of the nostril), eye–snout distance (ES, from the anterior border of the orbit to the tip of the snout), upper eyelid width (UEW, the maximum width of the upper eyelid), interorbital distance (IO, distance between the margins upper eyelids), internarial distance (IN, distance between the nostrils), upper arm length (UAL, from the axilla to elbow), lower arm length (LAL, from the posterior margin of the elbow to the base of the outer metacarpal tubercle), palm length (PAL, from the posterior border of the outer metacarpal tubercle to tip of the 3rd finger), femur length (FEL, from the cloaca to the knee), tibia length (TBL, from knee to heel), foot length (FOL, from inner metatarsal tubercle to the top of the 4th toe). Webbing formulae follows
Geographic range of the target species was calculated by plotting the known occurrences of the species on a distribution map generated using ARCGIS 10.5. The area within the minimum convex hull was computed by connecting the outermost occurrence points to calculate the extent of occurrence as defined by the IUCN (2001).
The suggested best substitution model for BI was GTR+F+I+G4 and for ML was TIM2+F+I+G4, both analyses showed an essentially consistent topology (Fig.
Genetic divergences (uncorrected p-distance in %) (%) between specimens identified as either Rhacophorus tuberculatus or R. verrucopus from different locations.
Species | Voucher | 1 | 2 | 3 | 4 |
---|---|---|---|---|---|
Rhacophorus tuberculatus | SACON VA – 148 India | ||||
SACON VA – 800 India | 0.22 | ||||
Rhacophorus “verrucopus” | SEABRI2019120056 Myanmar | 0.20 | 0.44 | ||
Rao6254 China | 1.50 | 1.74 | 1.24 | ||
KIZ014154 China | 1.54 | 1.74 | 1.28 | 0.00 |
Morphologically, the newly collected specimens (R. tuberculatus) from Meghalaya, India agree with the Syntype (ZSI 10154) and subsequent descriptions and figures by
Morphometric measurements (in mm) of R. tuberculatus and R. turpes from the current study (*Designated as lectotype).
Species | Rhacophorus tuberculatus (Voucher no., sex and values) | Rhacophorous turpes (Voucher No., sex and values) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Voucher no: Morphometric variables | *ZSI 10154 | SACON VA 143 | SACON VA 144 | SACON VA 145 | SACON VA 146 | SACON VA 147 | SACON VA 148 | SACON VA 800 | BMNH 1940.6.1.30 | BMNH 1974.828-832 |
Female | Male | Male | Male | Male | Male | Male | Female | Female | Female | |
SVL (mm) | 39.10 | 30.32 | 29.38 | 30.88 | 28.16 | 27.02 | 30.76 | 34.02 | 37.42 | 35.80 |
AG | 17.44 | 12.80 | 12.20 | 14.06 | 12.84 | 12.48 | 13.74 | 16.82 | 21.28 | 18.02 |
BW | 16.92 | 7.52 | 5.82 | 7.28 | 6.76 | 6.10 | 8.44 | 7.44 | 14.22 | 11.46 |
HL | 11.40 | 8.74 | 9.18 | 10.00 | 8.40 | 7.92 | 10.02 | 11.62 | 12.22 | 10.76 |
HW | 11.10 | 9.38 | 9.00 | 9.34 | 8.92 | 8.86 | 9.40 | 12.00 | 9.74 | 9.78 |
HD | 6.04 | 4.32 | 4.08 | 4.60 | 3.92 | 3.62 | 3.54 | 6.32 | 4.68 | 4.28 |
ED | 4.42 | 4.28 | 4.10 | 3.70 | 3.70 | 3.84 | 4.18 | 4.90 | 3.54 | 2.98 |
EN | 2.80 | 2.98 | 2.00 | 2.32 | 2.84 | 2.84 | 2.56 | 3.08 | 2.74 | 3.30 |
ES | 4.42 | 3.78 | 3.64 | 4.32 | 4.52 | 4.22 | 4.32 | 5.62 | 4.90 | 5.43 |
TYD | 1.82 | 1.68 | 1.80 | 2.08 | 1.20 | 1.72 | 1.70 | 2.38 | 2.44 | 2.76 |
ET | 1.24 | 0.48 | 0.80 | 0.52 | 0.60 | 0.40 | 0.72 | 0.66 | 1.12 | 1.18 |
UEW | 2.86 | 3.70 | 4.20 | 3.70 | 3.66 | 3.68 | 3.70 | 5.54 | 2.44 | 2.02 |
IO | 4.64 | 3.12 | 3.70 | 2.82 | 2.98 | 2.72 | 3.02 | 4.14 | 4.28 | 4.12 |
IN | 3.50 | 2.40 | 2.36 | 1.74 | 2.50 | 2.80 | 2.98 | 3.22 | 2.80 | 3.08 |
UAL | 6.46 | 5.72 | 5.62 | 4.72 | 4.92 | 4.04 | 4.50 | 5.42 | 5.24 | 6.98 |
LAL | 7.62 | 5.64 | 5.42 | 5.66 | 5.24 | 5.94 | 5.34 | 8.00 | 7.00 | 7.68 |
PAL | 9.42 | 6.84 | 7.32 | 7.20 | 6.90 | 6.70 | 7.40 | 9.58 | 9.18 | 8.64 |
FEL | 16.92 | 13.56 | 13.62 | 11.72 | 11.74 | 11.72 | 13.96 | 15.06 | 14.88 | 16.22 |
TBL | 18.80 | 15.48 | 14.82 | 13.8 | 14.4 | 13.74 | 14.32 | 17.28 | 16.90 | 18.28 |
TAL | 12.44 | 8.48 | 9.34 | 7.34 | 8.44 | 7.20 | 9.14 | 9.90 | 8.94 | 9.32 |
FOL | 19.76 | 11.12 | 10.88 | 9.38 | 9.84 | 9.28 | 11.88 | 12.96 | 10.82 | 10.36 |
Integrating the results of morphological data and also considering the shallow genetic divergence that is usually considered as intraspecific variation in the genus Rhacophorus, we second
Polypedates tuberculatus Anderson, 1871.
Rhacophorus tuberculata – Boulenger, 1882.
Rhacophorus (Rhacophorus) tuberculatus – Ahl, 1931.
Rhacophorus schlegelii tuberculatus – Wolf, 1936.
Rhacophorus verrucopus Huang, 1983, syn. nov.
Rhacophorus tuberculatus – Inger, 1985.
Rhacophorus (Rhacophorus) verrucopus – Dubois, 1987 «1986».
of Rhacophorus tuberculatus (Anderson, 1871). Specimens examined: ZSI 10154, lectotype by present designation, adult female, collected by Anderson from “Seebsaugor, Assam”; SACON VA – 143, 144, 145, 146, 147 and 148, adult males collected from near Sasatgre (25.5250°N, 90.3350°E, ca. 940 m asl.) by RSN between 13th – 26th May 2020 and SACON VA – 800 Adult female collected from near Baladingre (25.514213°N, 90.398204°E, ca. 835 m asl.) by RSN on 26th February 2022.
Rhacophorus tuberculatus can be differentiated from all known congeners by the following suite of external morphological characters: small to medium adult size (mean SVL 29.4 mm; range 27.0–30.9 mm); distinct tympanum, almost half as large as the eye; absence of vomerine teeth; presence of a prominent calcar at tibio-tarsal articulation; presence of partial, sheath-like webbing on fingers and fully developed webbing on toes; well-developed and expanded discs on toes; and a dorsal colouration of uniform pale brown with mild traces of an irregular patch on the head and mossy greenish patches near the shoulders in some individuals.
(Fig.
Dorsum, overall pale to medium brown in colour with small scattered black dots and three or four dark blackish brown transverse bands across the thigh and tibial region, tarsus feet and webbing between toes orangeish-red in colour. Webbing in fingers translucently yellow. Ventral sides mild brownish white and groins, thighs and the rest of the legs brownish yellow to dark red in colour. Some individuals with irregular florescent green patches on the head and mid body region (Fig.
The specimens of R. tuberculatus from Meghalaya examined during this study were collected from two different locations within West Garo Hills. A small shallow stream running parallel to the eastern boundary of the Sasatgre community reserve, the stream was bounded on both side by cardamom and banana plantations. The frogs were encountered at 1900 – 2300 hrs in the month of May, found perched on leaves of yam and cardamom plants, one to two meters above ground level. The other location was a similar habitat from another cardamom plantation near a forest patch near Baladingre village.
Morphological (in mm) comparisons between our newly collected specimens of Rhacophorus tuberculatus from India and R. verrucopus from China and Myanmar. Data for R. verrucopus from China were obtained from
Morphological variables | R. tuberculatus | R. verrucopus | R. verrucopus | ||
---|---|---|---|---|---|
India | China | Myanmar | |||
Mean (Range) Male, n=6 | Female, n=1 | Mean (Range) Male, n=7 | Female, n=1 | Female, n=1 | |
SVL | 29.4 (27.0–30.9) | 34.00 | 37.9 (36.0–40.6) | 41.60 | 52.00 |
HL | 9.0 (7.9–10.0) | 11.60 | 12.5 (12.0–13.0) | 12.20 | 17.60 |
HW | 9.2 (8.9–9.4) | 12.00 | 11.4 (10.9–12.3) | 11.60 | 15.70 |
ED | 4.0 (3.7–4.3) | 4.90 | 4.3 (3.9–4.9) | 5.20 | 5.40 |
ES | 4.1 (3.6–4.5) | 5.60 | 5.7 (5.1–6.7) | 5.90 | 7.70 |
TYD | 1.7 (1.2–2.1) | 2.40 | 2.2 (2.0–2.4) | 2.70 | 3.10 |
UEW | 3.8 (3.7–4.2) | 5.50 | 2.9 (2.5–3.6) | 3.40 | – |
IO | 3.1 (2.7–3.7) | 4.10 | 4.3 (3.8–5.0) | 3.60 | – |
IN | 2.5 (1.7–3.0) | 3.20 | 3.5 (3.2–4.1) | 3.10 | 4.30 |
LAL+ PAL | 12.6 (12.1–12.9) | 17.60 | 16.5 (16.0–17.0) | 18.80 | 17.80 |
PAL | 7.1 (6.7–7.4) | 9.60 | 10.6 (10.1–11.1) | 11.70 | – |
FEL | 12.7 (11.7–14.0) | 15.10 | 17.3 (16.3–17.9) | 20.50 | 22.90 |
TBL | 14.4 (13.7–15.5) | 17.30 | 17.9 (17.3–18.3) | 21.20 | 24.20 |
FOL | 10.4 (9.3–11.9) | 13.00 | 15.3 (14.6–16.2) | 19.00 | 20.40 |
HL/SVL | 0.31 (0.29–0.33) | 0.34 | 0.33 | 0.29 | 0.34 |
HL/HW | 0.99 (0.89–1.07) | 0.97 | 1.10 | 1.05 | 1.12 |
ED/HL | 0.44 (0.37–0.49) | 0.42 | 0.35 | 0.43 | 0.31 |
TYD/HL | 0.19 (0.14–0.22) | 0.21 | 0.17 | 0.22 | 0.18 |
FEL/SVL | 0.43 (0.38–0.46) | 0.44 | 0.46 | 0.49 | 0.44 |
TBL/SVL | 0.49 (0.45–0.51) | 0.51 | 0.47 | 0.51 | 0.47 |
TBL/FEL | 1.14 (1.03–1.23) | 1.15 | 1.04 | 1.03 | 1.06 |
“Darwinian shortfall” is a major challenge faced by conservationists today, the lack of availability of molecular data for several extant species is a common phenomenon across taxa, leading to a situation where phylogenetic information is absent for most organisms, thus inhibiting a robust understanding of phylogenetic relationships within a particular group (
The current study also addresses the re-assessment of the threat status of R. tuberculatus as per IUCN Red List criteria of this Data Deficient species. Rhacophorus tuberculatus was known with certainty only from its type locality until now. However, in this study, we were able to resolve the taxonomic confusion with this species thus mapping its actual distribution range for the first time. The new records of this species from West Garo hills of Meghalaya mark the westernmost limit of the distribution of the species (Fig.
First and foremost, we are grateful to Mr. Lising G. Momin and the villagers of Sasatgre village for their invaluable assistance during the fieldwork. Our sincere thanks are due to the Additional Principal Chief Conservator of Forests (Wildlife) and Chief Wildlife Warden (CWLW), Meghalaya, and officers of the Department of Forest and Environment, Government of Meghalaya, for facilitating permission from the Community Reserve Management Committees to carry out the field study (No. FWC/Research/15/603-04 dated 31st May 2019). We extend our thanks to the Technology Platform Services, C-CAMP, National Centre for Biological Sciences, for their expertise in sequencing samples used in this study. Additionally, our gratitude goes to Dr. Kaushik Deuti for helping with the examination of specimens from the Zoological Survey of India, and to Dr. David Gower, Dr. Jeff Streicher, Dr. Simon Loader and Dr. Rikki Gumbs for facilitating the examination of specimens from the British Natural History Museum.